Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: C21H15orf40 ENSBTAG00000016522

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Description

chromosome 21 C15orf40 homolog [Source:VGNC Symbol;Acc:VGNC:57157]

Location

Primary_assembly 21: 23,245,468-23,264,331 reverse strand.

ARS-UCD1.3:CM008188.2

About this gene

This gene has 4 transcripts (splice variants), 98 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000021969.6	C21H15orf40-203	1822	262aa	ENSBTAP00000021969.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E4M8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000089838.1	C21H15orf40-204	1732	166aa	ENSBTAP00000080573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000118342.1	C21H15orf40-202	1473	146aa	ENSBTAP00000097804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000068241.2	C21H15orf40-201	688	162aa	ENSBTAP00000062282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXP8	-

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Summary

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