Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMAD9 ENSBTAG00000007589

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Description

SMAD family member 9 [Source:VGNC Symbol;Acc:VGNC:34981]

Location

Primary_assembly 12: 24,771,643-24,795,963 forward strand.

ARS-UCD1.3:CM008179.2

About this gene

This gene has 4 transcripts (splice variants), 50 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009982.7	SMAD9-202	2175	455aa	ENSBTAP00000009982.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BG11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000072620.2	SMAD9-203	2100	430aa	ENSBTAP00000064737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N4I5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000134667.1	SMAD9-204	1878	356aa	ENSBTAP00000077785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000055714.2	SMAD9-201	1871	344aa	ENSBTAP00000047935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MWL7	-

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Summary

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