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EnsemblEnsembl Home

Find a Species

The main Ensembl site focuses on vertebrate genomes - scroll down for links to our sister sites covering invertebrates, plants, bacteria, etc.

Favourite genomes

Homo sapiensHuman
GRCh38.p10
Mus musculusMouse
GRCm38.p5
Danio rerioZebrafish
GRCz10

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Available genomes

Note: to find out which species were in previous releases, please see the table of assemblies

Common nameScientific nameTaxon IDEnsembl AssemblyAccessionGenebuild MethodVariation databaseRegulation database
Algerian mouseAlgerian mouseMus spretus10096SPRET_EiJ_v1GCA_001624865.1External annotation import-Y
AlpacaAlpacaVicugna pacos30538vicPac1-Projection build--
Amazon mollyAmazon mollyPoecilia formosa48698Poecilia_formosa-5.1.2GCA_000485575.1Full genebuild--
Anole lizardAnole lizardAnolis carolinensis28377AnoCar2.0GCA_000090745.1Full genebuild--
ArmadilloArmadilloDasypus novemcinctus9361Dasnov3.0GCA_000208655.2Mixed strategy build--
Brazilian guinea pigBrazilian guinea pigCavia aperea37548CavAp1.0GCA_000688575.1Full genebuild--
BushbabyBushbabyOtolemur garnettii30611OtoGar3GCA_000181295.3Full genebuild--
C.intestinalisC.intestinalisCiona intestinalis7719KHGCA_000224145.1Full genebuild-Y
C.savignyiC.savignyiCiona savignyi51511CSAV 2.0-Full genebuild--
C. elegansC. elegansCaenorhabditis elegans6239WBcel235GCA_000002985.3Import-Y
CatCatFelis catus9685Felis_catus_6.2GCA_000181335.2Mixed strategy buildY-
Cave fishCave fishAstyanax mexicanus7994AstMex102GCA_000372685.1Full genebuild--
ChickenChickenGallus gallus9031Gallus_gallus-5.0GCA_000002315.3Full genebuildYY
ChimpanzeeChimpanzeePan troglodytes9598CHIMP2.1.4GCA_000001515.4Full genebuildYY
Chinese hamster CHOK1GSChinese hamster CHOK1GSCricetulus griseus10029CHOK1GS_HDv1GCA_900186095.1Full genebuild-Y
Chinese hamster CriGriChinese hamster CriGriCricetulus griseus10029CriGri_1.0GCA_000223135.1Full genebuild-Y
Chinese softshell turtleChinese softshell turtlePelodiscus sinensis13735PelSin_1.0GCA_000230535.1Mixed strategy build--
CodCodGadus morhua8049gadMor1-Mixed strategy build--
CoelacanthCoelacanthLatimeria chalumnae7897LatCha1GCA_000225785.1Full genebuild--
CowCowBos taurus9913UMD3.1GCA_000003055.3Full genebuildYY
Damara mole ratDamara mole ratFukomys damarensis885580DMR_v1.0GCA_000743615.1Full genebuild--
DeguDeguOctodon degus10160OctDeg1.0GCA_000260255.1Full genebuild--
DogDogCanis lupus familiaris9615CanFam3.1GCA_000002285.2Full genebuildYY
DolphinDolphinTursiops truncatus9739turTru1-Projection build--
DuckDuckAnas platyrhynchos8839BGI_duck_1.0GCA_000355885.1Full genebuild--
ElephantElephantLoxodonta africana9785Loxafr3.0GCA_000001905.1Full genebuild--
FerretFerretMustela putorius furo9669MusPutFur1.0GCA_000215625.1Mixed strategy build--
FlycatcherFlycatcherFicedula albicollis59894FicAlb_1.4GCA_000247815.1Full genebuild--
FruitflyFruitflyDrosophila melanogaster7227BDGP6GCA_000001215.4ImportYY
FuguFuguTakifugu rubripes31033FUGU 4.0-Full genebuild--
GibbonGibbonNomascus leucogenys61853Nleu1.0GCA_000146795.1Full genebuildY-
Golden HamsterGolden HamsterMesocricetus auratus10036MesAur1.0GCA_000349665.1Full genebuild-Y
GorillaGorillaGorilla gorilla gorilla9595gorGor3.1GCA_000151905.1Full genebuild--
Guinea PigGuinea PigCavia porcellus10141Cavpor3.0GCA_000151735.1Full genebuild-Y
HedgehogHedgehogErinaceus europaeus9365eriEur1-Projection build--
HorseHorseEquus caballus9796Equ Cab 2GCA_000002305.1Full genebuildY-
HumanHumanHomo sapiens9606GRCh38.p10GCA_000001405.25Full genebuildYY
HyraxHyraxProcavia capensis9813proCap1-Projection build--
Kangaroo ratKangaroo ratDipodomys ordii10020Dord_2.0GCA_000151885.2Full genebuild--
LampreyLampreyPetromyzon marinus7757Pmarinus_7.0-Full genebuild--
Lesser Egyptian jerboaLesser Egyptian jerboaJaculus jaculus51337JacJac1.0GCA_000280705.1Full genebuild--
Lesser hedgehog tenrecLesser hedgehog tenrecEchinops telfairi9371TENREC-Projection build--
Long-tailed chinchillaLong-tailed chinchillaChinchilla lanigera34839ChiLan1.0GCA_000276665.1Full genebuild--
MacaqueMacaqueMacaca mulatta9544Mmul_8.0.1GCA_000772875.3Full genebuildYY
MarmosetMarmosetCallithrix jacchus9483C_jacchus3.2.1GCA_000004665.1Full genebuild--
MedakaMedakaOryzias latipes8090HdrR-Full genebuild--
MegabatMegabatPteropus vampyrus132908pteVam1-Projection build--
MicrobatMicrobatMyotis lucifugus59463Myoluc2.0GCA_000147115.1Full genebuild--
MouseMouseMus musculus10090GRCm38.p5GCA_000001635.7Full genebuildYY
Mouse 129S1/SvImJMouse 129S1/SvImJMus musculus10090129S1_SvImJ_v1GCA_001624185.1External annotation import-Y
Mouse A/JMouse A/JMus musculus10090A_J_v1GCA_001624215.1External annotation import-Y
Mouse AKR/JMouse AKR/JMus musculus10090AKR_J_v1GCA_001624295.1External annotation import-Y
Mouse BALB/cJMouse BALB/cJMus musculus10090BALB_cJ_v1GCA_001632525.1External annotation import-Y
Mouse C3H/HeJMouse C3H/HeJMus musculus10090C3H_HeJ_v1GCA_001632575.1External annotation import-Y
Mouse C57BL/6NJMouse C57BL/6NJMus musculus10090C57BL_6NJ_v1GCA_001632555.1External annotation import-Y
Mouse CAST/EiJMouse CAST/EiJMus musculus castaneus10091CAST_EiJ_v1GCA_001624445.1External annotation import-Y
Mouse CBA/JMouse CBA/JMus musculus10090CBA_J_v1GCA_001624475.1External annotation import-Y
Mouse DBA/2JMouse DBA/2JMus musculus10090DBA_2J_v1GCA_001624505.1External annotation import-Y
Mouse FVB/NJMouse FVB/NJMus musculus10090FVB_NJ_v1GCA_001624535.1External annotation import-Y
Mouse LP/JMouse LP/JMus musculus10090LP_J_v1GCA_001632615.1External annotation import-Y
Mouse LemurMouse LemurMicrocebus murinus30608Mmur_2.0GCA_000165445.2Full genebuild--
Mouse NOD/ShiLtJMouse NOD/ShiLtJMus musculus10090NOD_ShiLtJ_v1GCA_001624675.1External annotation import-Y
Mouse NZO/HlLtJMouse NZO/HlLtJMus musculus10090NZO_HlLtJ_v1GCA_001624745.1External annotation import-Y
Mouse PWK/PhJMouse PWK/PhJMus musculus musculus39442PWK_PhJ_v1GCA_001624775.1External annotation import-Y
Mouse WSB/EiJMouse WSB/EiJMus musculus domesticus10092WSB_EiJ_v1GCA_001624835.1External annotation import-Y
Naked mole-rat femaleNaked mole-rat femaleHeterocephalus glaber10181HetGla_female_1.0GCA_000247695.1Full genebuild--
Naked mole-rat maleNaked mole-rat maleHeterocephalus glaber10181HetGla_1.0GCA_000230445.1Full genebuild--
Northern American deer mouseNorthern American deer mousePeromyscus maniculatus bairdii230844Pman_1.0GCA_000500345.1Full genebuild--
Olive baboonOlive baboonPapio anubis9555PapAnu2.0GCA_000264685.1Full genebuild--
OpossumOpossumMonodelphis domestica13616monDom5GCF_000002295.2Full genebuildY-
OrangutanOrangutanPongo abelii9601PPYG2-Projection buildY-
PandaPandaAiluropoda melanoleuca9646ailMel1GCA_000004335.1Full genebuild--
PigPigSus scrofa9823Sscrofa11.1GCA_000003025.6Full genebuildYY
PikaPikaOchotona princeps9978OchPri2.0-Ens-Projection build--
PlatyfishPlatyfishXiphophorus maculatus8083Xipmac4.4.2GCA_000241075.1Full genebuild--
PlatypusPlatypusOrnithorhynchus anatinus9258OANA5GCF_000002275.2Full genebuildYY
Prairie volePrairie voleMicrotus ochrogaster79684MicOch1.0GCA_000317375.1Full genebuild--
RabbitRabbitOryctolagus cuniculus9986OryCun2.0GCA_000003625.1Full genebuild-Y
RatRatRattus norvegicus10116Rnor_6.0GCA_000001895.4Mixed strategy buildYY
Ryukyu mouseRyukyu mouseMus caroli10089CAROLI_EIJ_v1.1GCA_900094665.2External annotation import--
S. cerevisiaeS. cerevisiaeSaccharomyces cerevisiae4932R64-1-1GCA_000146045.2ImportYY
SheepSheepOvis aries9940Oar_v3.1GCA_000298735.1Mixed strategy buildY-
ShrewShrewSorex araneus42254sorAra1-Projection build--
Shrew mouseShrew mouseMus pahari10093PAHARI_EIJ_v1.1GCA_900095145.2External annotation import--
SlothSlothCholoepus hoffmanni9358choHof1-Projection build--
Spotted garSpotted garLepisosteus oculatus7918LepOcu1GCA_000242695.1Full genebuild--
SquirrelSquirrelIctidomys tridecemlineatus43179SpeTri2.0GCA_000236235.1Full genebuild--
SticklebackSticklebackGasterosteus aculeatus69293BROAD S1-Full genebuild--
TarsierTarsierCarlito syrichta1868482tarSyr1-Projection build--
Tasmanian devilTasmanian devilSarcophilus harrisii9305Devil_ref v7.0GCA_000189315.1Mixed strategy build--
TetraodonTetraodonTetraodon nigroviridis99883TETRAODON 8.0-Full genebuildY-
TilapiaTilapiaOreochromis niloticus8128Orenil1.0GCA_000188235.1Mixed strategy build--
Tree ShrewTree ShrewTupaia belangeri37347tupBel1-Projection build--
TurkeyTurkeyMeleagris gallopavo9103Turkey_2.01GCA_000146605.1Full genebuildY-
Upper Galilee mountains blind mole ratUpper Galilee mountains blind mole ratNannospalax galili1026970S.galili_v1.0GCA_000622305.1Full genebuild-Y
Vervet-AGMVervet-AGMChlorocebus sabaeus60711ChlSab1.1GCA_000409795.2Full genebuild--
WallabyWallabyNotamacropus eugenii9315Meug_1.0GCA_000004035.1Projection build--
XenopusXenopusXenopus tropicalis8364JGI 4.2GCA_000004195.1Full genebuild-Y
Zebra FinchZebra FinchTaeniopygia guttata59729taeGut3.2.4-Full genebuildY-
ZebrafishZebrafishDanio rerio7955GRCz10GCA_000002035.3Mixed strategy buildYY

Credits page for species images

Other Metazoa

Additional metazoan genomes (initially insect vectors and nematodes) are available from EnsemblMetazoa

Plants and Fungi

Plant and fungal genomes can be found at EnsemblPlants and EnsemblFungi

Protists, Bacteria and Archaea

Unicellular eukaryotic and prokaryotic genomes can be found at EnsemblProtists and EnsemblBacteria respectively.