Ensembl mobile site help

Things to know when navigating the Ensembl mobile site

Search box

Use the search box at the top right of all Ensembl views to search for a gene, phenotype, sequence variant, and more.

Top navigation

Touch MENU button to open the main menu and touch again to close.

Touch MENU

Left hand side menu

Touch the left menu icon () or swipe right to open the side menu and touch anywhere outside the menu or touch the cross icon or swipe left to close.

The ? icon

Touch the icon to get help

And don't forget to send us your comments using the feedback link inside the main menu.

EnsemblEnsembl Home

Saccharomyces cerevisiae assembly and gene annotation

Assembly

Saccharomyces cerevisiae is a unicellular fungus. It is commonly known as baker's, brewer's or budding yeast. It is used in the production of a number of human foodstuffs, including alcoholic beverages and in the baking industry, and is widely used as a model species in the study of eukaryotic biology. In 1996, the genome of S. cerevisiae was the first eukaryotic genome to be completely deciphered.

The data on this site is a direct import of the Saccharomyces Genome Database (SGD) dataset for the Saccharomyces cerevisiae S288C genome, imported in February 2011, supplemented with additional cross-references and annotations. We have also included the variation data from the Saccharomyces Genome Resequencing Project (SGRP) and functional genomics data from Yeast Genome 2.0 Array and Yeast Genome S98 Array.

References

  • Genetic and physical maps of Saccharomyces cerevisiae.

    Cherry JM, Ball C, Weng S, Juvik G, Schmidt R, Adler C, Dunn B, Dwight S, Riles L, Mortimer RK, Botstein D

    Nature 1997 387(6632 Suppl):67-73.

    PubMed:9169866

  • Population genomics of domestic and wild yeasts.

    Liti G, Carter DM, Moses AM, Warringer J, Parts L, James SA, Davey RP, Roberts IN, Burt A, Koufopanou V, Tsai IJ, Bergman CM, Bensasson D, O'Kelly MJ, van Oudenaarden A, Barton DB, Bailes E, Nguyen AN, Jones M, Quail MA, Goodhead I, Sims S, Smith F, Blomberg A, Durbin R, Louis EJ.

    Nature. 2009 Mar 19;458(7236):337-41. Epub 2009 Feb 11.

    PubMed:19212322

  • A large-scale full-length cDNA analysis to explore the budding yeast transcriptome.

    Miura F., Kawaguchi N., Sese J., Toyoda A., Hattori M., Morishita S., Ito T.

    Proc. Natl. Acad. Sci. U.S.A. 103(47): 17846-51 (2006)

    PubMed:17101987

The genome assembly represented here corresponds to GCA_000146045.2

Gene annotation

This species and other fungi are also available from our sister site, Ensembl Fungi

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyR64-1-1 (Saccharomyces cerevisiae S288c assembly from Saccharomyces Genome Database), INSDC Assembly GCA_000146045.2, Sep 2011
Base Pairs12,157,105
Golden Path Length12,157,105
Annotation providerSGD
Annotation methodImport
Genebuild startedJan 2017
Genebuild releasedAug 2018
Genebuild last updated/patchedJul 2018
Database version94.4

Gene counts

Coding genes6,600
Non coding genes424
Small non coding genes424
Pseudogenes12
Gene transcripts7,036

Other

Short Variants263,537

About this species