Mouse (GRCm39)
Description

U2 small nuclear RNA auxiliary factor 1-like 4 [Source:MGI Symbol;Acc:MGI:2678374]

Gene Synonyms

U2af26, auxiliary factor 26

Location
About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 609 variant alleles and maps to 241 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000043273.16U2af1l4-201884220aaENSMUSP00000039406.10
 
Protein coding
CCDS21100Q8BGJ9 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000167361.8U2af1l4-221860122aaENSMUSP00000146834.2
 
Protein coding
A0A140LII6 GENCODE basicTSL:2
ENSMUST00000166510.8U2af1l4-216835210aaENSMUSP00000132316.2
 
Protein coding
E9Q1I7 GENCODE basicTSL:5
ENSMUST00000163654.8U2af1l4-206781188aaENSMUSP00000131048.2
 
Protein coding
Q8BGJ9-2 GENCODE basicTSL:2
ENSMUST00000166960.8U2af1l4-21874790aaENSMUSP00000146831.2
 
Protein coding
A0A140LII3 GENCODE basicTSL:3
ENSMUST00000163482.8U2af1l4-20566855aaENSMUSP00000130649.2
 
Protein coding
E9Q5D0 GENCODE basicTSL:5
ENSMUST00000163464.8U2af1l4-204651216aaENSMUSP00000125959.2
 
Protein coding
E9Q5J3 GENCODE basicTSL:5
ENSMUST00000163330.3U2af1l4-203583105aaENSMUSP00000129385.3
 
Protein coding
E9PWA1 TSL:3CDS 3' incomplete
ENSMUST00000171850.8U2af1l4-234564187aaENSMUSP00000131781.2
 
Protein coding
E9PUZ3 GENCODE basicTSL:5
ENSMUST00000166257.8U2af1l4-215546181aaENSMUSP00000125838.2
 
Protein coding
E9Q5Y2 GENCODE basicTSL:5
ENSMUST00000168931.8U2af1l4-227405119aaENSMUSP00000129697.2
 
Protein coding
E9Q3S9 TSL:3CDS 3' incomplete
ENSMUST00000167202.8U2af1l4-220399120aaENSMUSP00000146344.2
 
Protein coding
A0A140LHB1 TSL:3CDS 3' incomplete
ENSMUST00000168555.8U2af1l4-22688337aaENSMUSP00000131654.2
 
Nonsense mediated decay
E9PWX6 TSL:3
ENSMUST00000168333.8U2af1l4-225590102aaENSMUSP00000128950.2
 
Nonsense mediated decay
E9Q809 TSL:5
ENSMUST00000165722.2U2af1l4-21357253aaENSMUSP00000125790.2
 
Nonsense mediated decay
F7D8X7 TSL:5CDS 5' incomplete
ENSMUST00000168229.8U2af1l4-22456646aaENSMUSP00000132915.2
 
Nonsense mediated decay
E9PWM2 TSL:5
ENSMUST00000167501.8U2af1l4-22250537aaENSMUSP00000129102.2
 
Nonsense mediated decay
E9PWX6 TSL:3
ENSMUST00000163276.8U2af1l4-20250237aaENSMUSP00000127233.2
 
Nonsense mediated decay
E9PWX6 TSL:5
ENSMUST00000164365.8U2af1l4-20850024aaENSMUSP00000131193.2
 
Nonsense mediated decay
F7A6Z4 TSL:5CDS 5' incomplete
ENSMUST00000163848.8U2af1l4-20743937aaENSMUSP00000132536.2
 
Nonsense mediated decay
E9PWX6 TSL:5
ENSMUST00000166864.8U2af1l4-217353No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000165773.8U2af1l4-214874No protein-
 
Retained intron
-TSL:2
ENSMUST00000169283.8U2af1l4-229728No protein-
 
Retained intron
-TSL:2
ENSMUST00000168222.8U2af1l4-223715No protein-
 
Retained intron
-TSL:5
ENSMUST00000169911.8U2af1l4-230656No protein-
 
Retained intron
-TSL:2
ENSMUST00000164438.8U2af1l4-209635No protein-
 
Retained intron
-TSL:2
ENSMUST00000169071.8U2af1l4-228629No protein-
 
Retained intron
-TSL:2
ENSMUST00000165009.2U2af1l4-210626No protein-
 
Retained intron
-TSL:5
ENSMUST00000165524.9U2af1l4-211582No protein-
 
Retained intron
-TSL:5
ENSMUST00000169962.2U2af1l4-231568No protein-
 
Retained intron
-TSL:2
ENSMUST00000167024.2U2af1l4-219562No protein-
 
Retained intron
-TSL:2
ENSMUST00000165543.8U2af1l4-212519No protein-
 
Retained intron
-TSL:2
ENSMUST00000170453.2U2af1l4-232410No protein-
 
Retained intron
-TSL:3
ENSMUST00000171364.2U2af1l4-233202No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 7, Coding exons: 7, Transcript length: 564 bps, Translation length: 187 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000171850.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.