Mouse (GRCm39)
Description

Pbx/knotted 1 homeobox 2 [Source:MGI Symbol;Acc:MGI:2445415]

Gene Synonyms

D230005H23Rik, Prep2

Location
About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 13620 variant alleles and maps to 281 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000039674.13Pknox2-2013632474aaENSMUSP00000035806.6
 
Protein coding
CCDS22974Q8BG99 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000080754.12Pknox2-2023431474aaENSMUSP00000079578.6
 
Protein coding
CCDS22974Q8BG99 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000177218.8Pknox2-2073393474aaENSMUSP00000135581.2
 
Protein coding
CCDS22974Q8BG99 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000188348.7Pknox2-21070093aaENSMUSP00000139976.2
 
Protein coding
A0A087WPZ3 TSL:3CDS 3' incomplete
ENSMUST00000177444.8Pknox2-20861173aaENSMUSP00000135641.4
 
Protein coding
H3BL39 TSL:3CDS 3' incomplete
ENSMUST00000189294.7Pknox2-21245649aaENSMUSP00000139728.2
 
Protein coding
A0A087WPD3 TSL:5CDS 3' incomplete
ENSMUST00000188057.7Pknox2-20943988aaENSMUSP00000140793.2
 
Protein coding
A0A087WRV9 TSL:3CDS 3' incomplete
ENSMUST00000175938.9Pknox2-203175940aaENSMUSP00000138866.2
 
Nonsense mediated decay
V9GWW7 TSL:5
ENSMUST00000177080.8Pknox2-2061699No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000213653.2Pknox2-213657No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000188433.2Pknox2-211406No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000215175.2Pknox2-2142832No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176622.8Pknox2-2052266No protein-
 
Retained intron
-TSL:2
ENSMUST00000176562.8Pknox2-2042029No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 13, Coding exons: 10, Transcript length: 3,632 bps, Translation length: 474 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BG99

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22974

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000039674.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.