Mouse (GRCm39)
Description

RNA polymerase II associated protein 1 [Source:MGI Symbol;Acc:MGI:1916175]

Gene Synonyms

1190005L06Rik, A730023M06Rik

About this transcript

This transcript has 26 exons, is annotated with 26 domains and features, is associated with 1892 variant alleles and maps to 351 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000110793.8Rpap1-20354581409aaENSMUSP00000106420.2
 
Protein coding
CCDS16610Q80TE0 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000099529.9Rpap1-20248131409aaENSMUSP00000097127.3
 
Protein coding
CCDS16610Q80TE0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000048493.12Rpap1-20147441409aaENSMUSP00000037275.6
 
Protein coding
CCDS16610Q80TE0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000136419.8Rpap1-2054546167aaENSMUSP00000138619.2
 
Nonsense mediated decay
S4R2F2 TSL:1
ENSMUST00000184294.8Rpap1-2094085869aaENSMUSP00000138873.2
 
Nonsense mediated decay
V9GWX3 TSL:1
ENSMUST00000141800.2Rpap1-207606No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000139311.8Rpap1-2064714No protein-
 
Retained intron
-TSL:1
ENSMUST00000156506.8Rpap1-2081385No protein-
 
Retained intron
-TSL:1
ENSMUST00000133146.2Rpap1-204629No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 26, Coding exons: 24, Transcript length: 5,458 bps, Translation length: 1,409 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80TE0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16610

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000110793.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.