Mouse (GRCm39)
Description

CTR9 homolog, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:109345]

Gene Synonyms

Sh2bp1, Tsbp, Tsp

About this transcript

This transcript has 25 exons, is annotated with 52 domains and features, is associated with 1570 variant alleles and maps to 379 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000005749.6Ctr9-20143001173aaENSMUSP00000005749.6
 
Protein coding
CCDS21750Q62018 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000123681.2Ctr9-202392No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000152019.2Ctr9-2072987No protein-
 
Retained intron
-TSL:1
ENSMUST00000209912.2Ctr9-2092412No protein-
 
Retained intron
-TSL:NA
ENSMUST00000157025.8Ctr9-2081594No protein-
 
Retained intron
-TSL:1
ENSMUST00000146709.2Ctr9-206765No protein-
 
Retained intron
-TSL:2
ENSMUST00000140220.2Ctr9-203535No protein-
 
Retained intron
-TSL:2
ENSMUST00000143818.2Ctr9-204464No protein-
 
Retained intron
-TSL:2
ENSMUST00000146558.2Ctr9-205437No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,300 bps, Translation length: 1,173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62018

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21750

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000005749.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.