Transcript: ENSDART00000122128.3 nenf-202

Description

neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]

Gene Synonyms

wu:fa11a04, wu:fb73f07, zgc:112953, zgc:152703

Location

About this transcript

This transcript has 3 exons, is associated with 327 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058793.7	nenf-201	1470	188aa	ENSDARP00000058792.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R378	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122128.3	nenf-202	1159	78aa	ENSDARP00000124998.1	Nonsense mediated decay	F8W5S0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,159 bps, Translation length: 78 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000122128.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.